Bits & Flames bitsandflames/fyron

Example Gallery

Use this gallery to find a runnable synthetic workflow before adapting Fyron to private data.

ExampleShowsMain artifacts
FHIR To Cohortpublic FHIR query to patient-level cohort shapecohort DataFrame
FHIR To Table OneFHIR-like rows to descriptive baseline tableTable 1
FHIR Paths & Custom ExtractionFHIRPath presets and custom extraction functionsflattened resource table
DICOM BOA Validationimaging-derived feature validation shapefeature table and validation metrics
BOA CollagesCT/mask review collagePNG review figure
Volume Difference Heatmapaligned CT/MR slice difference visualizationfigure and difference summary table
Dataset PreparationnnU-Net v2, YOLO classification, YOLO detection folder buildersdataset folders and manifests
Cohort Flow Explainabilitydecorated filters, joins, flow exports, model explanationflow table, Markdown, figure
Manuscript Statistics WorkflowTable 1, FDR correction, regression, Cox diagnosticsmanuscript-ready tables
Manuscript Plotting Workflowstatistical annotations, KM, forest plots, palettespaper-ready figures
Visual Figure Gallerygenerated manuscript-style plot examplesPNG figure gallery
Synthetic GAN Volumegenerated CT export to NIfTI and DICOMimage files and manifest
DICOM SEG Exportsource-referenced segmentation exportDICOM SEG object
FHIR Imaging Measurementsimaging-derived measurements as FHIRFHIR JSON bundle

Visual Figure Examples

The generated figure previews now live on the Visual Figure Gallery. Use it to scan manuscript-style plots before choosing the right plotting helper.

Choosing A Starting Point

GoalStart here
Understand the whole study shapeClinical AI Study Workflow
Prepare image folders for reviewFyron Curate
Compare module responsibilitiesModules Overview
Learn function arguments quicklyFunction Reference
Prepare repository or manuscript trust materialUsing Fyron In Research